Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC12.59□□□□□ -0.39
SEC61A1P61619 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
SEC61A1P61619 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
SEC61A1P61619 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
SEC61A1P61619 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SEC61A1P61619 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
SEC61A1P61619 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.39
SEC61A1P61619 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SEC61A1P61619 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
SEC61A1P61619 AL365181.3-201ENST00000605886 3222 ntBASIC12.58□□□□□ -0.39
SEC61A1P61619 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
SEC61A1P61619 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC61A1P61619 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 RPL13AP20-201ENST00000459725 609 ntBASIC12.58□□□□□ -0.4
SEC61A1P61619 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.58□□□□□ -0.4
SEC61A1P61619 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC023310.1-201ENST00000554836 735 ntBASIC12.58□□□□□ -0.4
SEC61A1P61619 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC12.58□□□□□ -0.4
SEC61A1P61619 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC12.58□□□□□ -0.4
SEC61A1P61619 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.58□□□□□ -0.4
SEC61A1P61619 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.58□□□□□ -0.4
SEC61A1P61619 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
SEC61A1P61619 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 REXO1L1P-201ENST00000379010 6598 ntBASIC12.58□□□□□ -0.4
SEC61A1P61619 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC020910.6-201ENST00000623084 1459 ntBASIC12.58□□□□□ -0.4
SEC61A1P61619 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
SEC61A1P61619 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
SEC61A1P61619 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.57□□□□□ -0.4
SEC61A1P61619 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 AGGF1P1-201ENST00000509500 2073 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
SEC61A1P61619 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC12.57□□□□□ -0.4
SEC61A1P61619 BRWD1P1-201ENST00000401091 371 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AC245100.3-201ENST00000441281 285 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AC026434.2-201ENST00000506094 1078 ntBASIC12.57□□□□□ -0.4
SEC61A1P61619 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC12.57□□□□□ -0.4
SEC61A1P61619 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms