Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.69□□□□□ -0.38
GFRA1P56159 GUSBP10-201ENST00000417412 665 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 AC098935.1-201ENST00000446057 611 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 RN7SL788P-201ENST00000460504 316 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 AP002803.1-201ENST00000528836 498 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC12.69□□□□□ -0.38
GFRA1P56159 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 NAA40-205ENST00000539656 577 ntTSL 4 BASIC12.69□□□□□ -0.38
GFRA1P56159 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.69□□□□□ -0.38
GFRA1P56159 AC145285.5-201ENST00000562217 361 ntBASIC12.69□□□□□ -0.38
GFRA1P56159 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC12.69□□□□□ -0.38
GFRA1P56159 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC12.69□□□□□ -0.38
GFRA1P56159 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
GFRA1P56159 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.69□□□□□ -0.38
GFRA1P56159 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
GFRA1P56159 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
GFRA1P56159 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
GFRA1P56159 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 AL157996.1-201ENST00000624684 2299 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 AC004554.1-201ENST00000422830 1468 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 RCC2P1-201ENST00000452257 1476 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 PYY2-201ENST00000315776 282 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 RPS2P36-201ENST00000456516 831 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 SCARNA12-201ENST00000459155 270 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC12.68□□□□□ -0.38
GFRA1P56159 MIR3147-201ENST00000577811 66 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 MIR4722-201ENST00000578292 60 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 RPL17P45-201ENST00000586289 509 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
GFRA1P56159 COX6A1P2-201ENST00000620597 330 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 AC025262.2-201ENST00000623975 1056 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC12.68□□□□□ -0.38
GFRA1P56159 GOLGA8EP-201ENST00000530246 1959 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
GFRA1P56159 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.68□□□□□ -0.38
GFRA1P56159 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 MST1P2-201ENST00000457982 2291 ntBASIC12.68□□□□□ -0.38
GFRA1P56159 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
GFRA1P56159 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GFRA1P56159 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
GFRA1P56159 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms