Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 AK2P2-201ENST00000439142 405 ntBASIC14.48□□□□□ -0.09
CDH4P55283 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 AC098934.1-203ENST00000442868 1262 ntBASIC14.48□□□□□ -0.09
CDH4P55283 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH4P55283 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC14.48□□□□□ -0.09
CDH4P55283 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH4P55283 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC14.48□□□□□ -0.09
CDH4P55283 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 MIR4522-201ENST00000584932 87 ntBASIC14.48□□□□□ -0.09
CDH4P55283 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
CDH4P55283 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH4P55283 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH4P55283 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH4P55283 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 KRT8P43-201ENST00000406052 1458 ntBASIC14.47□□□□□ -0.09
CDH4P55283 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
CDH4P55283 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH4P55283 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.47□□□□□ -0.09
CDH4P55283 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH4P55283 AL512306.1-201ENST00000432698 848 ntBASIC14.47□□□□□ -0.09
CDH4P55283 AL627422.1-201ENST00000434104 580 ntBASIC14.47□□□□□ -0.09
CDH4P55283 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH4P55283 CHCHD2P9-201ENST00000461726 456 ntBASIC14.47□□□□□ -0.09
CDH4P55283 RN7SL81P-201ENST00000493781 261 ntBASIC14.47□□□□□ -0.09
CDH4P55283 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH4P55283 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH4P55283 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC14.47□□□□□ -0.09
CDH4P55283 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.47□□□□□ -0.09
CDH4P55283 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 AC016629.1-201ENST00000596579 586 ntBASIC14.47□□□□□ -0.09
CDH4P55283 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH4P55283 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.47□□□□□ -0.09
CDH4P55283 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
CDH4P55283 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.47□□□□□ -0.09
CDH4P55283 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CDH4P55283 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
CDH4P55283 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 AC006372.4-201ENST00000624122 1543 ntBASIC14.46□□□□□ -0.09
CDH4P55283 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
CDH4P55283 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms