Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 AC026803.1-201ENST00000569130 274 ntBASIC18.04■□□□□ 0.48
BRPF1P55201 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.04■□□□□ 0.48
BRPF1P55201 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18.04■□□□□ 0.48
BRPF1P55201 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC18.04■□□□□ 0.48
BRPF1P55201 WT1-AS_6.1-201ENST00000614919 121 ntBASIC18.04■□□□□ 0.48
BRPF1P55201 AP001065.2-201ENST00000617205 644 ntBASIC18.04■□□□□ 0.48
BRPF1P55201 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC18.04■□□□□ 0.48
BRPF1P55201 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BRPF1P55201 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC18.04■□□□□ 0.48
BRPF1P55201 FMO6P-201ENST00000236166 1620 ntBASIC18.04■□□□□ 0.48
BRPF1P55201 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.04■□□□□ 0.48
BRPF1P55201 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
BRPF1P55201 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
BRPF1P55201 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC18.04■□□□□ 0.48
BRPF1P55201 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC18.03■□□□□ 0.48
BRPF1P55201 CEP164P1-201ENST00000455142 418 ntBASIC18.03■□□□□ 0.48
BRPF1P55201 PPOX-204ENST00000462866 473 ntTSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC18.03■□□□□ 0.48
BRPF1P55201 STUB1-204ENST00000564370 875 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
BRPF1P55201 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC18.03■□□□□ 0.48
BRPF1P55201 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
BRPF1P55201 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 AC015909.5-201ENST00000624336 2266 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC18.02■□□□□ 0.48
BRPF1P55201 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC18.02■□□□□ 0.48
BRPF1P55201 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC18.02■□□□□ 0.48
BRPF1P55201 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC18.02■□□□□ 0.48
BRPF1P55201 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC18.02■□□□□ 0.48
BRPF1P55201 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
BRPF1P55201 AC242376.1-201ENST00000559033 726 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 NAT9-211ENST00000580632 799 ntTSL 3 BASIC18.02■□□□□ 0.48
BRPF1P55201 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
BRPF1P55201 AL133467.4-201ENST00000602953 725 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 LINC01783-202ENST00000614408 828 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 BX284668.2-205ENST00000619677 828 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 AC009560.1-201ENST00000620208 434 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 CASP16P-204ENST00000635032 809 ntBASIC18.02■□□□□ 0.48
BRPF1P55201 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC18.02■□□□□ 0.47
BRPF1P55201 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
BRPF1P55201 AC093462.1-201ENST00000621167 1683 ntBASIC18.02■□□□□ 0.47
BRPF1P55201 AC089987.1-201ENST00000551654 2209 ntBASIC18.02■□□□□ 0.47
BRPF1P55201 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
BRPF1P55201 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC18.01■□□□□ 0.47
BRPF1P55201 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms