Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 ACSL4-202ENST00000348502 5032 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.51□□□□□ -0.25
CLK1P49759 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLK1P49759 ARSEP1-201ENST00000420443 635 ntBASIC13.51□□□□□ -0.25
CLK1P49759 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.51□□□□□ -0.25
CLK1P49759 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.51□□□□□ -0.25
CLK1P49759 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.51□□□□□ -0.25
CLK1P49759 TWSG1-201ENST00000262120 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 ZNF778-202ENST00000433976 3608 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
CLK1P49759 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 CICP16-201ENST00000502609 2813 ntBASIC13.51□□□□□ -0.25
CLK1P49759 SNCAIP-203ENST00000379538 2588 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
CLK1P49759 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 MLPH-201ENST00000264605 3823 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 OS9-218ENST00000551035 2246 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.51□□□□□ -0.25
CLK1P49759 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
CLK1P49759 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CLK1P49759 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.5□□□□□ -0.25
CLK1P49759 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 AC003102.2-201ENST00000589195 1469 ntBASIC13.5□□□□□ -0.25
CLK1P49759 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 CLUHP2-201ENST00000426660 1303 ntBASIC13.5□□□□□ -0.25
CLK1P49759 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.5□□□□□ -0.25
CLK1P49759 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 FTH1P14-201ENST00000482930 551 ntBASIC13.5□□□□□ -0.25
CLK1P49759 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC13.5□□□□□ -0.25
CLK1P49759 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 AP000812.2-201ENST00000538934 718 ntBASIC13.5□□□□□ -0.25
CLK1P49759 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.5□□□□□ -0.25
CLK1P49759 AC079316.1-201ENST00000548397 411 ntBASIC13.5□□□□□ -0.25
CLK1P49759 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.5□□□□□ -0.25
CLK1P49759 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 AC006453.4-201ENST00000636949 1252 ntBASIC13.5□□□□□ -0.25
CLK1P49759 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
CLK1P49759 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 PI4KAP2-211ENST00000486209 3213 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CLK1P49759 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC13.5□□□□□ -0.25
CLK1P49759 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms