Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SYNM-203ENST00000560674 5908 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
CENPAP49450 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CENPAP49450 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 CANX-202ENST00000452673 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 PLEKHM1P1-202ENST00000578036 4318 ntTSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 ARHGAP21-217ENST00000612832 5514 ntTSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 FAM197Y7-201ENST00000432892 766 ntBASIC13.03□□□□□ -0.32
CENPAP49450 INE1-201ENST00000456273 945 ntBASIC13.03□□□□□ -0.32
CENPAP49450 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 AC106820.3-201ENST00000561653 397 ntBASIC13.03□□□□□ -0.32
CENPAP49450 SPECC1-223ENST00000584527 940 ntTSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 AC015936.2-201ENST00000593177 259 ntBASIC13.03□□□□□ -0.32
CENPAP49450 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 RPSAP52-203ENST00000622976 1023 ntBASIC13.03□□□□□ -0.32
CENPAP49450 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 AC025048.6-201ENST00000634326 1161 ntBASIC13.03□□□□□ -0.32
CENPAP49450 AL358933.1-201ENST00000565046 2830 ntBASIC13.03□□□□□ -0.32
CENPAP49450 ESPL1-205ENST00000552462 6447 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.03□□□□□ -0.32
CENPAP49450 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 SFMBT2-201ENST00000361972 7922 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CENPAP49450 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CENPAP49450 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CENPAP49450 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CENPAP49450 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.02□□□□□ -0.32
CENPAP49450 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
CENPAP49450 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
CENPAP49450 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CENPAP49450 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC13.02□□□□□ -0.33
CENPAP49450 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
CENPAP49450 AC005229.1-201ENST00000392885 409 ntBASIC13.02□□□□□ -0.33
CENPAP49450 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 CD8B2-202ENST00000417670 633 ntBASIC13.02□□□□□ -0.33
CENPAP49450 AC016694.1-201ENST00000434179 700 ntBASIC13.02□□□□□ -0.33
CENPAP49450 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 FTH1P14-201ENST00000482930 551 ntBASIC13.02□□□□□ -0.33
CENPAP49450 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC13.02□□□□□ -0.33
CENPAP49450 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
CENPAP49450 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 MIR4683-201ENST00000579659 81 ntBASIC13.02□□□□□ -0.33
CENPAP49450 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC13.02□□□□□ -0.33
CENPAP49450 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CENPAP49450 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC13.02□□□□□ -0.33
CENPAP49450 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms