Protein–RNA interactions for Protein: P40198

CEACAM3, Carcinoembryonic antigen-related cell adhesion molecule 3, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3P40198 PAX7-203ENST00000420770 5538 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 RN7SKP214-201ENST00000364208 315 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
CEACAM3P40198 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC125604.1-201ENST00000496255 707 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 RCC2P8-201ENST00000502779 1035 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 SCARNA20.5-201ENST00000516991 142 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC11.69□□□□□ -0.54
CEACAM3P40198 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 AC092299.1-201ENST00000632679 757 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 AL805961.1-203ENST00000641078 1258 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 SPTBN2-201ENST00000309996 7866 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 USP28-214ENST00000545540 3431 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 AL805961.2-201ENST00000642139 4817 ntBASIC11.69□□□□□ -0.54
CEACAM3P40198 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 RAN-210ENST00000541630 1475 ntTSL 2 BASIC11.69□□□□□ -0.54
CEACAM3P40198 EPHB1-201ENST00000398015 4672 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC11.69□□□□□ -0.54
CEACAM3P40198 FBN3-207ENST00000601739 9086 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CEACAM3P40198 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.68□□□□□ -0.54
CEACAM3P40198 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 HSPA7-201ENST00000445535 1927 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 AC005840.4-201ENST00000541242 2494 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC11.68□□□□□ -0.54
CEACAM3P40198 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC11.68□□□□□ -0.54
CEACAM3P40198 AC090857.1-201ENST00000527400 390 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 SKA2-205ENST00000580541 689 ntTSL 3 BASIC11.68□□□□□ -0.54
CEACAM3P40198 MIR4538-201ENST00000581377 78 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 MIR3188-201ENST00000583494 85 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC11.68□□□□□ -0.54
CEACAM3P40198 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
CEACAM3P40198 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 AC018735.1-201ENST00000437208 1502 ntBASIC11.68□□□□□ -0.54
CEACAM3P40198 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CEACAM3P40198 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC11.68□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms