Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
CPS1P31327 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC19.4■□□□□ 0.7
CPS1P31327 PSMA7-202ENST00000370861 773 ntTSL 5 BASIC19.4■□□□□ 0.7
CPS1P31327 SNU13-204ENST00000402458 462 ntTSL 3 BASIC19.4■□□□□ 0.7
CPS1P31327 MIR1307-201ENST00000408840 149 ntBASIC19.4■□□□□ 0.7
CPS1P31327 NOS2P3-201ENST00000411468 867 ntBASIC19.4■□□□□ 0.7
CPS1P31327 NOS2P2-201ENST00000426269 867 ntBASIC19.4■□□□□ 0.7
CPS1P31327 ZBTB46-AS1-201ENST00000435912 533 ntTSL 3 BASIC19.4■□□□□ 0.7
CPS1P31327 RN7SL479P-201ENST00000472003 300 ntBASIC19.4■□□□□ 0.7
CPS1P31327 AC068858.1-201ENST00000525114 1239 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 FOS-205ENST00000555242 629 ntTSL 2 BASIC19.4■□□□□ 0.7
CPS1P31327 MIR4459-201ENST00000581837 66 ntBASIC19.4■□□□□ 0.7
CPS1P31327 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC19.4■□□□□ 0.7
CPS1P31327 AC022966.2-201ENST00000587434 367 ntBASIC19.4■□□□□ 0.7
CPS1P31327 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CPS1P31327 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
CPS1P31327 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPS1P31327 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
CPS1P31327 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
CPS1P31327 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.39■□□□□ 0.7
CPS1P31327 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPS1P31327 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPS1P31327 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CPS1P31327 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 AC144831.1-201ENST00000573312 2656 ntBASIC19.39■□□□□ 0.69
CPS1P31327 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CPS1P31327 KRT8P38-201ENST00000441370 1430 ntBASIC19.39■□□□□ 0.69
CPS1P31327 AC015802.1-201ENST00000588104 1449 ntBASIC19.39■□□□□ 0.69
CPS1P31327 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 AC012158.1-201ENST00000535684 1366 ntTSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 AC069061.4-201ENST00000581294 1347 ntBASIC19.39■□□□□ 0.69
CPS1P31327 PIGL-202ENST00000395844 1257 ntTSL 5 BASIC19.39■□□□□ 0.69
CPS1P31327 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC19.39■□□□□ 0.69
CPS1P31327 AACSP1-202ENST00000521412 1095 ntBASIC19.39■□□□□ 0.69
CPS1P31327 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC19.39■□□□□ 0.69
CPS1P31327 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC19.39■□□□□ 0.69
CPS1P31327 Metazoa_SRP.122-201ENST00000610476 285 ntBASIC19.39■□□□□ 0.69
CPS1P31327 SDHD-214ENST00000614349 516 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CPS1P31327 BAP1-211ENST00000615113 489 ntBASIC19.39■□□□□ 0.69
CPS1P31327 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC19.39■□□□□ 0.69
CPS1P31327 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC19.39■□□□□ 0.69
CPS1P31327 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CPS1P31327 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CPS1P31327 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 PTN-202ENST00000393083 1599 ntTSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 USP39-207ENST00000450066 2086 ntTSL 2 BASIC19.38■□□□□ 0.69
CPS1P31327 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC19.38■□□□□ 0.69
CPS1P31327 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CPS1P31327 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 CD8B-202ENST00000349455 849 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC19.38■□□□□ 0.69
CPS1P31327 RBMX2P5-201ENST00000424312 969 ntBASIC19.38■□□□□ 0.69
CPS1P31327 OR52X1P-201ENST00000446117 914 ntBASIC19.38■□□□□ 0.69
CPS1P31327 RPL30-213ENST00000523172 274 ntTSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 AC078923.1-201ENST00000552856 748 ntTSL 3 BASIC19.38■□□□□ 0.69
CPS1P31327 PEX11A-204ENST00000561224 529 ntTSL 4 BASIC19.38■□□□□ 0.69
CPS1P31327 AC092296.1-201ENST00000587018 566 ntTSL 4 BASIC19.38■□□□□ 0.69
CPS1P31327 AC136475.7-201ENST00000602949 592 ntBASIC19.38■□□□□ 0.69
CPS1P31327 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 AC089987.1-201ENST00000551654 2209 ntBASIC19.38■□□□□ 0.69
CPS1P31327 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 CEBPZOS-203ENST00000397226 1499 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CPS1P31327 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC19.38■□□□□ 0.69
CPS1P31327 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CPS1P31327 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CPS1P31327 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC19.37■□□□□ 0.69
CPS1P31327 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms