Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 SENP3-202ENST00000429205 2222 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 FTO-214ENST00000636218 2227 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 AC010141.1-201ENST00000411585 623 ntBASIC14.14□□□□□ -0.15
VARSP26640 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 YY1P1-201ENST00000427625 668 ntBASIC14.14□□□□□ -0.15
VARSP26640 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC14.14□□□□□ -0.15
VARSP26640 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 UPF3AP2-201ENST00000457924 1132 ntBASIC14.14□□□□□ -0.15
VARSP26640 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 AC100850.1-201ENST00000506768 649 ntBASIC14.14□□□□□ -0.15
VARSP26640 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
VARSP26640 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC14.14□□□□□ -0.15
VARSP26640 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.14□□□□□ -0.15
VARSP26640 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
VARSP26640 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 SHC1P1-201ENST00000425230 1745 ntBASIC14.14□□□□□ -0.15
VARSP26640 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
VARSP26640 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14.14□□□□□ -0.15
VARSP26640 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 TRIM80P-201ENST00000455685 2848 ntBASIC14.14□□□□□ -0.15
VARSP26640 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
VARSP26640 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 AC092053.3-201ENST00000641308 4975 ntBASIC14.13□□□□□ -0.15
VARSP26640 AC087386.2-201ENST00000623212 4637 ntBASIC14.13□□□□□ -0.15
VARSP26640 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
VARSP26640 OLR1-203ENST00000432556 950 ntTSL 2 BASIC14.13□□□□□ -0.15
VARSP26640 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC14.13□□□□□ -0.15
VARSP26640 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 SORD2P-201ENST00000558556 1069 ntBASIC14.13□□□□□ -0.15
VARSP26640 AC009712.1-201ENST00000564938 316 ntBASIC14.13□□□□□ -0.15
VARSP26640 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.13□□□□□ -0.15
VARSP26640 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC14.13□□□□□ -0.15
VARSP26640 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.13□□□□□ -0.15
VARSP26640 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 PRKN-211ENST00000615065 261 ntTSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 AC015967.2-201ENST00000624092 234 ntBASIC14.13□□□□□ -0.15
VARSP26640 AC006435.4-201ENST00000625037 234 ntBASIC14.13□□□□□ -0.15
VARSP26640 AL356737.1-201ENST00000634391 234 ntBASIC14.13□□□□□ -0.15
VARSP26640 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.13□□□□□ -0.15
VARSP26640 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 PPP1R3D-201ENST00000370996 3630 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
VARSP26640 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC14.13□□□□□ -0.15
VARSP26640 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 HSPA8P5-201ENST00000456928 2069 ntBASIC14.13□□□□□ -0.15
VARSP26640 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC14.13□□□□□ -0.15
VARSP26640 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
VARSP26640 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.13□□□□□ -0.15
VARSP26640 HPD-204ENST00000543163 1709 ntTSL 5 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms