Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CHMP24386 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CHMP24386 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 FAM58BP-201ENST00000439056 645 ntBASIC13.39□□□□□ -0.27
CHMP24386 AC004898.1-201ENST00000451057 766 ntBASIC13.39□□□□□ -0.27
CHMP24386 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.39□□□□□ -0.27
CHMP24386 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.39□□□□□ -0.27
CHMP24386 AC103810.3-201ENST00000583567 96 ntBASIC13.39□□□□□ -0.27
CHMP24386 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 VASH2-202ENST00000366964 2960 ntTSL 5 BASIC13.39□□□□□ -0.27
CHMP24386 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 AC019294.4-201ENST00000561777 2905 ntBASIC13.39□□□□□ -0.27
CHMP24386 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHMP24386 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHMP24386 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
CHMP24386 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 AK6-201ENST00000380818 1183 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 NFATC2-203ENST00000414705 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 PTPA-218ENST00000435132 618 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 PUDPP3-201ENST00000445368 636 ntBASIC13.38□□□□□ -0.27
CHMP24386 AL035414.1-201ENST00000451327 857 ntBASIC13.38□□□□□ -0.27
CHMP24386 AC104306.2-201ENST00000451877 341 ntBASIC13.38□□□□□ -0.27
CHMP24386 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 KRT8P13-201ENST00000463294 1010 ntBASIC13.38□□□□□ -0.27
CHMP24386 AC022494.1-201ENST00000466044 728 ntBASIC13.38□□□□□ -0.27
CHMP24386 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.38□□□□□ -0.27
CHMP24386 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.38□□□□□ -0.27
CHMP24386 AP001258.2-201ENST00000529891 490 ntBASIC13.38□□□□□ -0.27
CHMP24386 NOP2-211ENST00000540228 668 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 EMC4-209ENST00000559421 497 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 DUX4L46-201ENST00000566845 751 ntBASIC13.38□□□□□ -0.27
CHMP24386 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC13.38□□□□□ -0.27
CHMP24386 AL023803.2-201ENST00000620080 638 ntBASIC13.38□□□□□ -0.27
CHMP24386 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.38□□□□□ -0.27
CHMP24386 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.38□□□□□ -0.27
CHMP24386 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CHMP24386 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 AL365181.3-201ENST00000605886 3222 ntBASIC13.38□□□□□ -0.27
CHMP24386 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 CES1P1-201ENST00000421606 1704 ntBASIC13.38□□□□□ -0.27
CHMP24386 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHMP24386 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms