Protein–RNA interactions for Protein: P13569

CFTR, Cystic fibrosis transmembrane conductance regulator, humanhuman

Predictions only

Length 1,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFTRP13569 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 ASMT-203ENST00000381241 1388 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 SUCLG2-203ENST00000492795 1512 ntTSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 TUBA3GP-201ENST00000410028 1325 ntBASIC23.31■■□□□ 1.32
CFTRP13569 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
CFTRP13569 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC23.31■■□□□ 1.32
CFTRP13569 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
CFTRP13569 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 KRTAP10-11-201ENST00000334670 1237 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CFTRP13569 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC23.3■■□□□ 1.32
CFTRP13569 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 RAB6B-205ENST00000486858 880 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 RN7SL2-201ENST00000490232 300 ntBASIC23.3■■□□□ 1.32
CFTRP13569 IGHVII-33-1-201ENST00000524010 280 ntBASIC23.3■■□□□ 1.32
CFTRP13569 RN7SL4P-201ENST00000584058 295 ntBASIC23.3■■□□□ 1.32
CFTRP13569 FAM90A28P-201ENST00000596881 489 ntTSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC23.3■■□□□ 1.32
CFTRP13569 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC23.3■■□□□ 1.32
CFTRP13569 AC245427.1-201ENST00000633705 760 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
CFTRP13569 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 DANT2-201ENST00000430756 2079 ntTSL 3 BASIC23.3■■□□□ 1.32
CFTRP13569 PINX1-201ENST00000314787 1545 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 SLC38A5-210ENST00000595796 2659 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
CFTRP13569 RN7SKP255-201ENST00000363442 313 ntBASIC23.3■■□□□ 1.32
CFTRP13569 RN7SKP203-201ENST00000363618 332 ntBASIC23.3■■□□□ 1.32
CFTRP13569 RN7SKP71-201ENST00000364558 318 ntBASIC23.3■■□□□ 1.32
CFTRP13569 7SK.1-201ENST00000365328 331 ntBASIC23.3■■□□□ 1.32
CFTRP13569 HYKK-201ENST00000388988 1235 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 RPSAP61-201ENST00000412542 878 ntBASIC23.3■■□□□ 1.32
CFTRP13569 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC23.3■■□□□ 1.32
CFTRP13569 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 AC067942.1-202ENST00000471756 1057 ntBASIC23.3■■□□□ 1.32
CFTRP13569 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC23.3■■□□□ 1.32
CFTRP13569 MIR4640-201ENST00000581824 90 ntBASIC23.3■■□□□ 1.32
CFTRP13569 MIR4526-201ENST00000583168 87 ntBASIC23.3■■□□□ 1.32
CFTRP13569 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 AC002985.1-201ENST00000596918 685 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 PAX8-AS1-219ENST00000623306 840 ntTSL 5 BASIC23.3■■□□□ 1.32
CFTRP13569 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
CFTRP13569 LINC02226-201ENST00000501071 1587 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 TP73-207ENST00000378290 1831 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC23.29■■□□□ 1.32
CFTRP13569 CA6-205ENST00000480186 1493 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC23.29■■□□□ 1.32
CFTRP13569 SIGLEC20P-201ENST00000595243 1311 ntBASIC23.29■■□□□ 1.32
CFTRP13569 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
CFTRP13569 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC23.29■■□□□ 1.32
CFTRP13569 AC024475.2-201ENST00000312173 879 ntBASIC23.29■■□□□ 1.32
CFTRP13569 BTF3-202ENST00000380591 1237 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 CIDEC-204ENST00000430427 877 ntTSL 3 BASIC23.29■■□□□ 1.32
CFTRP13569 HNRNPA1P73-201ENST00000446472 928 ntBASIC23.29■■□□□ 1.32
CFTRP13569 AC010997.1-201ENST00000447646 350 ntBASIC23.29■■□□□ 1.32
CFTRP13569 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC23.29■■□□□ 1.32
CFTRP13569 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CFTRP13569 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFTRP13569 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CFTRP13569 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CFTRP13569 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
CFTRP13569 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC23.28■■□□□ 1.32
CFTRP13569 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC23.28■■□□□ 1.32
CFTRP13569 VAPB-202ENST00000395802 1834 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFTRP13569 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CFTRP13569 SERPINB8P1-201ENST00000401898 377 ntBASIC23.28■■□□□ 1.32
CFTRP13569 AC079325.1-201ENST00000430386 857 ntBASIC23.28■■□□□ 1.32
CFTRP13569 AP000343.1-201ENST00000440602 385 ntBASIC23.28■■□□□ 1.32
CFTRP13569 AC010395.2-201ENST00000509899 904 ntBASIC23.28■■□□□ 1.32
CFTRP13569 MIR4539-201ENST00000579784 60 ntBASIC23.28■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms