Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.11□□□□□ -0.15
COL6A2P12110 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.11□□□□□ -0.15
COL6A2P12110 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.11□□□□□ -0.15
COL6A2P12110 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 AL358472.5-202ENST00000641448 1267 ntBASIC14.11□□□□□ -0.15
COL6A2P12110 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 AC092053.3-201ENST00000641308 4975 ntBASIC14.11□□□□□ -0.15
COL6A2P12110 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 AC024075.2-201ENST00000598112 1473 ntBASIC14.11□□□□□ -0.15
COL6A2P12110 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.11□□□□□ -0.15
COL6A2P12110 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC14.11□□□□□ -0.15
COL6A2P12110 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
COL6A2P12110 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
COL6A2P12110 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 AMT-221ENST00000538581 2038 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14.1□□□□□ -0.15
COL6A2P12110 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 PSME3-203ENST00000541124 3366 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 CU639417.3-201ENST00000624240 1404 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 TMEM14DP-201ENST00000422205 345 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC14.1□□□□□ -0.15
COL6A2P12110 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 HNRNPA1P36-201ENST00000521313 955 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 AC079316.1-201ENST00000548397 411 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 AC132938.2-201ENST00000579188 680 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.1□□□□□ -0.15
COL6A2P12110 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
COL6A2P12110 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 AC144522.1-201ENST00000625111 1658 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 AHCYP4-201ENST00000419201 1315 ntBASIC14.1□□□□□ -0.15
COL6A2P12110 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
COL6A2P12110 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
COL6A2P12110 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
COL6A2P12110 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 OS9-206ENST00000435406 2346 ntTSL 2 BASIC14.09□□□□□ -0.15
COL6A2P12110 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC14.09□□□□□ -0.15
COL6A2P12110 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
COL6A2P12110 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
COL6A2P12110 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 SNORA50C-201ENST00000408535 133 ntBASIC14.09□□□□□ -0.15
COL6A2P12110 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 RN7SL692P-201ENST00000464677 288 ntBASIC14.09□□□□□ -0.15
COL6A2P12110 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
COL6A2P12110 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.09□□□□□ -0.15
COL6A2P12110 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC14.09□□□□□ -0.15
COL6A2P12110 PGAM1P5-201ENST00000548011 764 ntBASIC14.09□□□□□ -0.15
COL6A2P12110 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
COL6A2P12110 AC023310.1-201ENST00000554836 735 ntBASIC14.09□□□□□ -0.15
COL6A2P12110 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.09□□□□□ -0.15
COL6A2P12110 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms