Protein–RNA interactions for Protein: P07951

TPM2, Tropomyosin beta chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM2P07951 AC139530.3-201ENST00000620344 690 ntBASIC16.31■□□□□ 0.2
TPM2P07951 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM2P07951 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM2P07951 AC022497.1-201ENST00000624916 3691 ntBASIC16.31■□□□□ 0.2
TPM2P07951 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM2P07951 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
TPM2P07951 CHD5-201ENST00000262450 9646 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 SPAG5-AS1-201ENST00000414744 2143 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 PER1-202ENST00000354903 3115 ntTSL 2 BASIC16.31■□□□□ 0.2
TPM2P07951 SLC25A18-202ENST00000399813 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
TPM2P07951 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
TPM2P07951 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 RBM15-205ENST00000618772 3431 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
TPM2P07951 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 MAP4-204ENST00000395734 5590 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 RHOH-217ENST00000610353 2268 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
TPM2P07951 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 PCDHB19P-202ENST00000625133 2914 ntBASIC16.3■□□□□ 0.2
TPM2P07951 AC060814.4-201ENST00000594169 2163 ntBASIC16.3■□□□□ 0.2
TPM2P07951 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 AC009093.1-201ENST00000566070 2099 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 PDZD4-209ENST00000544474 3418 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
TPM2P07951 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.3■□□□□ 0.2
TPM2P07951 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 AC003958.1-201ENST00000435883 421 ntBASIC16.3■□□□□ 0.2
TPM2P07951 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.3■□□□□ 0.2
TPM2P07951 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM2P07951 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
TPM2P07951 MIR8072-201ENST00000614241 80 ntBASIC16.3■□□□□ 0.2
TPM2P07951 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC16.3■□□□□ 0.2
TPM2P07951 VRK3-209ENST00000594948 1847 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC16.3■□□□□ 0.2
TPM2P07951 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
TPM2P07951 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 STAT3-203ENST00000404395 2633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
TPM2P07951 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM2P07951 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.29■□□□□ 0.2
TPM2P07951 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM2P07951 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 KRT8P35-201ENST00000483942 1338 ntBASIC16.29■□□□□ 0.2
TPM2P07951 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM2P07951 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 ACKR1-201ENST00000368121 1240 ntBASIC16.29■□□□□ 0.2
TPM2P07951 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
TPM2P07951 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.29■□□□□ 0.2
TPM2P07951 INGX-202ENST00000489074 768 ntBASIC16.29■□□□□ 0.2
TPM2P07951 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM2P07951 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.29■□□□□ 0.2
TPM2P07951 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM2P07951 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 OCA2-202ENST00000354638 3186 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TPM2P07951 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
TPM2P07951 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC16.29■□□□□ 0.2
TPM2P07951 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms