Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
MT-ND1P03886 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC13.49□□□□□ -0.25
MT-ND1P03886 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 AC002472.2-201ENST00000442739 958 ntBASIC13.49□□□□□ -0.25
MT-ND1P03886 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC13.49□□□□□ -0.25
MT-ND1P03886 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.49□□□□□ -0.25
MT-ND1P03886 BX088702.1-201ENST00000610784 235 ntBASIC13.49□□□□□ -0.25
MT-ND1P03886 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
MT-ND1P03886 ABBA01031660.1-201ENST00000635219 756 ntBASIC13.49□□□□□ -0.25
MT-ND1P03886 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 AL033527.5-201ENST00000641382 801 ntBASIC13.49□□□□□ -0.25
MT-ND1P03886 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
MT-ND1P03886 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
MT-ND1P03886 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.49□□□□□ -0.25
MT-ND1P03886 GPR107-208ENST00000610997 2813 ntTSL 5 BASIC13.49□□□□□ -0.25
MT-ND1P03886 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
MT-ND1P03886 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.49□□□□□ -0.25
MT-ND1P03886 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 VPS54-203ENST00000409558 4337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 PPT2-EGFL8-202ENST00000422437 4181 ntAPPRIS P5 TSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 CATSPERE-203ENST00000366534 3333 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 AL391647.1-201ENST00000395664 511 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 AC236430.1-201ENST00000402231 743 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.48□□□□□ -0.25
MT-ND1P03886 BCRP1-201ENST00000444246 691 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 SPCS2P1-201ENST00000561636 679 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 AC005586.2-201ENST00000563946 837 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 AC104506.1-201ENST00000609247 429 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.48□□□□□ -0.25
MT-ND1P03886 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.48□□□□□ -0.25
MT-ND1P03886 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 HK2-201ENST00000290573 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 MKRN5P-201ENST00000445263 1467 ntBASIC13.48□□□□□ -0.25
MT-ND1P03886 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
MT-ND1P03886 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms