Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TIMP1P01033 WARS-203ENST00000358655 2466 ntTSL 2 BASIC15.04■□□□□ -0
TIMP1P01033 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 AL513477.1-201ENST00000602865 2407 ntBASIC15.04■□□□□ -0
TIMP1P01033 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.04■□□□□ -0
TIMP1P01033 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TIMP1P01033 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TIMP1P01033 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.04■□□□□ -0
TIMP1P01033 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 HORMAD1-202ENST00000361824 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 CLUAP1-201ENST00000341633 1643 ntTSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 CCL17-201ENST00000219244 615 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 CD44-203ENST00000278386 484 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 MYL4-202ENST00000393450 855 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 SAP18P2-201ENST00000434334 459 ntBASIC15.03■□□□□ -0
TIMP1P01033 HLA-W-207ENST00000439514 771 ntBASIC15.03■□□□□ -0
TIMP1P01033 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC15.03■□□□□ -0
TIMP1P01033 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 OR4A49P-201ENST00000527050 632 ntBASIC15.03■□□□□ -0
TIMP1P01033 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 YWHAE-212ENST00000575977 540 ntTSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 MIR5091-201ENST00000578707 93 ntBASIC15.03■□□□□ -0
TIMP1P01033 EEF1DP7-201ENST00000580496 513 ntBASIC15.03■□□□□ -0
TIMP1P01033 AC106782.5-201ENST00000616011 337 ntBASIC15.03■□□□□ -0
TIMP1P01033 AC137723.2-201ENST00000623540 398 ntBASIC15.03■□□□□ -0
TIMP1P01033 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC15.03■□□□□ -0
TIMP1P01033 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.03■□□□□ -0
TIMP1P01033 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 DNAJB6-204ENST00000429029 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
TIMP1P01033 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.02■□□□□ -0
TIMP1P01033 LINC02347-203ENST00000540774 1442 ntTSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TIMP1P01033 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 GUCY2EP-203ENST00000531117 1918 ntBASIC15.02■□□□□ -0
TIMP1P01033 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.02■□□□□ -0
TIMP1P01033 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 FTH1P18-201ENST00000412071 549 ntBASIC15.02■□□□□ -0
TIMP1P01033 AC007679.1-201ENST00000458609 502 ntBASIC15.02■□□□□ -0
TIMP1P01033 RN7SL173P-201ENST00000461853 292 ntBASIC15.02■□□□□ -0
TIMP1P01033 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC15.02■□□□□ -0
TIMP1P01033 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC15.02■□□□□ -0
TIMP1P01033 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TIMP1P01033 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.02■□□□□ -0
TIMP1P01033 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TIMP1P01033 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC15.02□□□□□ -0.01
TIMP1P01033 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC15.02□□□□□ -0.01
TIMP1P01033 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 PSMC5-201ENST00000310144 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TIMP1P01033 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TIMP1P01033 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
TIMP1P01033 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TIMP1P01033 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TIMP1P01033 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC15.01□□□□□ -0.01
TIMP1P01033 KRT8P25-201ENST00000473150 1456 ntBASIC15.01□□□□□ -0.01
TIMP1P01033 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 MMP19-202ENST00000409200 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
TIMP1P01033 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms