Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 AL805961.1-201ENST00000642026 753 ntBASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 LINC01230-201ENST00000625222 3017 ntBASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA3F8WFD2 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ST13P19-201ENST00000442505 1124 ntBASIC13□□□□□ -0.33
NPIPA3F8WFD2 RPSAP15-201ENST00000448168 861 ntBASIC13□□□□□ -0.33
NPIPA3F8WFD2 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC008267.1-201ENST00000474858 1069 ntBASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC007326.1-201ENST00000604539 458 ntBASIC13□□□□□ -0.33
NPIPA3F8WFD2 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AC152010.1-201ENST00000415779 2006 ntBASIC13□□□□□ -0.33
NPIPA3F8WFD2 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA3F8WFD2 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA3F8WFD2 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC074138.1-201ENST00000611182 1303 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 AC064801.2-201ENST00000625052 1303 ntBASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
NPIPA3F8WFD2 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms