Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.02□□□□□ -0.33
NPIPA2E9PIF3 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 AC117489.1-201ENST00000625169 3217 ntBASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BEX2-201ENST00000372674 668 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 LYPLA2-202ENST00000374502 1072 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BANF1P3-201ENST00000412556 261 ntBASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 DUX4L50-201ENST00000455245 715 ntBASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 RHEB-207ENST00000496004 744 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 AL805961.1-201ENST00000642026 753 ntBASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 LINC01230-201ENST00000625222 3017 ntBASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
NPIPA2E9PIF3 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 USP31-203ENST00000567975 2142 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
NPIPA2E9PIF3 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
NPIPA2E9PIF3 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC13□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms