Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 BRWD1P1-201ENST00000401091 371 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 MIR1908-201ENST00000410394 80 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 OR8T1P-201ENST00000421347 918 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 PPP1R2P4-201ENST00000424051 595 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 WBP2-203ENST00000433525 928 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AC005740.1-201ENST00000515639 522 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 AL022328.3-201ENST00000607943 679 ntBASIC12.54□□□□□ -0.4
NPIPB4C9JG80 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.54□□□□□ -0.4
NPIPB4C9JG80 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 Z98885.3-201ENST00000624882 1757 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AF013593.1-201ENST00000458074 1487 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 HNRNPA1P41-201ENST00000397777 928 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 LINC00265-2P-201ENST00000413372 782 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC006033.1-201ENST00000440505 426 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 OARD1-212ENST00000482515 832 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NDUFB10P1-201ENST00000567319 521 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 MIR6752-201ENST00000618442 71 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 CNTNAP3P2-201ENST00000617175 3861 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AL355102.3-201ENST00000554299 1678 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 AC020658.7-201ENST00000624274 2442 ntBASIC12.53□□□□□ -0.4
NPIPB4C9JG80 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.53□□□□□ -0.4
NPIPB4C9JG80 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms