Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 ESYT3-202ENST00000389567 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 FO681548.1-201ENST00000455617 1132 ntBASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AP001063.1-201ENST00000568332 529 ntBASIC15.55■□□□□ 0.08
CCDC66A2RUB6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AC004466.1-201ENST00000599515 1080 ntBASIC15.55■□□□□ 0.08
CCDC66A2RUB6 ABCB9-201ENST00000280560 3517 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
CCDC66A2RUB6 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 REXO1L1P-201ENST00000379010 6598 ntBASIC15.54■□□□□ 0.08
CCDC66A2RUB6 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 MAMDC4-201ENST00000317446 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CYTH1-203ENST00000585509 3315 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PLB1-205ENST00000422425 5115 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 AC087499.6-201ENST00000411576 835 ntBASIC15.54■□□□□ 0.08
CCDC66A2RUB6 AC098850.1-201ENST00000419919 790 ntBASIC15.54■□□□□ 0.08
CCDC66A2RUB6 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 DAXX-202ENST00000374542 2613 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 FOXN3-201ENST00000261302 2542 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
CCDC66A2RUB6 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 AC111170.3-201ENST00000624282 2464 ntBASIC15.53■□□□□ 0.08
CCDC66A2RUB6 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC15.53■□□□□ 0.08
CCDC66A2RUB6 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms