Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC099336.1-201ENST00000417053 1171 ntBASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 HLA-V-201ENST00000429037 534 ntBASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 HNRNPA1P36-201ENST00000521313 955 ntBASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC005962.1-201ENST00000584100 773 ntBASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC021016.3-201ENST00000608367 477 ntBASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RNF11Q9Y3C5 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC144522.1-201ENST00000625111 1658 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC005034.1-201ENST00000426657 489 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ACA64.2-201ENST00000459014 129 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ACR-203ENST00000529621 708 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC124068.2-201ENST00000569473 1109 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 AC009884.2-201ENST00000603110 324 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 LRP8-201ENST00000306052 7648 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 MIR497HG-202ENST00000572453 3838 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 CYP4F23P-201ENST00000593402 1579 ntBASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RNF11Q9Y3C5 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 STK3-218ENST00000617590 2485 ntTSL 5 BASIC13.91□□□□□ -0.18
RNF11Q9Y3C5 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms