Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 CDCA4P4-201ENST00000435216 680 ntBASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AC002127.2-201ENST00000444032 792 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 NDUFB2P1-201ENST00000506966 295 ntBASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 SAA2-206ENST00000530400 323 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 CMTM1-219ENST00000533953 934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 GABARAPL1-213ENST00000544284 531 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 APOPT1-215ENST00000556253 783 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AC090282.1-201ENST00000572821 534 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 SNORA50D-202ENST00000627561 132 ntBASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 Z82244.1-201ENST00000631502 840 ntBASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 GSN-203ENST00000373808 2664 ntTSL 2 BASIC20.49■□□□□ 0.87
SHANK2Q9UPX8 AC106881.1-201ENST00000605849 3329 ntBASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 STK16-202ENST00000409260 1493 ntTSL 5 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 CCL25-202ENST00000315626 450 ntTSL 2 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 SNORA57-201ENST00000383870 149 ntBASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 AC136604.1-202ENST00000425471 771 ntBASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 KCNK15-AS1-203ENST00000427598 862 ntTSL 2 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 AC113347.2-201ENST00000512350 279 ntBASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 AC142086.5-202ENST00000562500 217 ntBASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
SHANK2Q9UPX8 PTN-202ENST00000393083 1599 ntTSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AC011477.7-201ENST00000617163 1440 ntBASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AC034205.3-201ENST00000603595 1376 ntBASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 TRAPPC4-202ENST00000434101 794 ntTSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AC120498.7-201ENST00000562876 330 ntBASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 CR392039.2-201ENST00000623182 509 ntBASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SHANK2Q9UPX8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 AKR1B1-201ENST00000285930 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 DDC-212ENST00000615193 1674 ntTSL 3 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 NQO2-204ENST00000380454 851 ntTSL 2 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 AC104212.2-201ENST00000478813 628 ntBASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 HOXC-AS3-203ENST00000514702 368 ntTSL 3 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 OR4A49P-201ENST00000527050 632 ntBASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 HIST1H3E-201ENST00000614911 462 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SHANK2Q9UPX8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
SHANK2Q9UPX8 KRT8P24-201ENST00000560290 1559 ntBASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SHANK2Q9UPX8 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms