Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 AMT-256ENST00000638063 1783 ntTSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
ZC3H4Q9UPT8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 SAPCD1-AS1-202ENST00000419679 461 ntTSL 3 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 AL161932.2-201ENST00000435436 679 ntBASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 AC099328.1-201ENST00000498809 1030 ntBASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 COQ10BP2-201ENST00000513804 724 ntBASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 AC087072.1-201ENST00000603727 421 ntBASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 POLL-206ENST00000370172 2308 ntTSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
ZC3H4Q9UPT8 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 SNORD88B-201ENST00000408454 91 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 FDPSP7-201ENST00000429043 1054 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AL031587.2-201ENST00000445483 414 ntTSL 5 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AL136084.1-201ENST00000449172 318 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 LAMTOR1-208ENST00000545249 965 ntTSL 3 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AL359219.1-201ENST00000556311 934 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AC012617.1-202ENST00000586488 509 ntTSL 2 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 Metazoa_SRP.128-201ENST00000620543 314 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 AL121753.2-201ENST00000624581 1461 ntBASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
ZC3H4Q9UPT8 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 RHOC-205ENST00000369636 786 ntTSL 2 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 AC010086.2-201ENST00000428616 226 ntBASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 HNRNPA1P10-201ENST00000444945 962 ntBASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 RN7SL684P-201ENST00000465665 294 ntBASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 CRYBB2P1-204ENST00000509460 701 ntTSL 3 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 MST1L-204ENST00000545160 559 ntTSL 4 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SHBG-217ENST00000576478 639 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 AC091588.3-201ENST00000583442 770 ntTSL 3 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
ZC3H4Q9UPT8 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms