Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
COPS3Q9UNS2 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 COG6-202ENST00000416691 5257 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
COPS3Q9UNS2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AC092933.1-201ENST00000393644 945 ntBASIC12.77□□□□□ -0.37
COPS3Q9UNS2 GRAP-202ENST00000395635 834 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AL035414.1-201ENST00000451327 857 ntBASIC12.77□□□□□ -0.37
COPS3Q9UNS2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AC027796.2-201ENST00000575326 344 ntBASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 LPO-203ENST00000421678 2729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 TMBIM7P-202ENST00000641474 1516 ntBASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
COPS3Q9UNS2 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 TMEM260-201ENST00000261556 4264 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 COX5BP1-201ENST00000507622 393 ntBASIC12.76□□□□□ -0.37
COPS3Q9UNS2 SPCS2P1-201ENST00000561636 679 ntBASIC12.76□□□□□ -0.37
COPS3Q9UNS2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 RN7SL713P-201ENST00000582127 302 ntBASIC12.76□□□□□ -0.37
COPS3Q9UNS2 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.76□□□□□ -0.37
COPS3Q9UNS2 AL096865.1-201ENST00000606796 927 ntBASIC12.76□□□□□ -0.37
COPS3Q9UNS2 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
COPS3Q9UNS2 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms