Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AC025271.4-201ENST00000621477 1726 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 AC018463.1-201ENST00000456674 917 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 RN7SL277P-201ENST00000481521 288 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 BAP1-211ENST00000615113 489 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 AC073911.3-201ENST00000624401 631 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 LINC01815-202ENST00000641468 1409 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 AGAP10P-201ENST00000454844 2418 ntBASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 HADH-202ENST00000403312 1752 ntTSL 5 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 TOMM40L-201ENST00000367987 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 GMPR2-204ENST00000420554 1864 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
RPAP1Q9BWH6 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 AC067930.6-201ENST00000623257 4947 ntBASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RPAP1Q9BWH6 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms