Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 LINC01993-201ENST00000374945 2934 ntTSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 PRMT7-201ENST00000339507 4238 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 SYNRG-229ENST00000621136 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 FLNA-203ENST00000369850 8382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
SEC22CQ9BRL7 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CADM1-206ENST00000537058 3550 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CACNB1-202ENST00000394303 3742 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 NAP1L1-201ENST00000261182 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 RPL37AP1-201ENST00000412502 279 ntBASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 AL161932.2-201ENST00000435436 679 ntBASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SPDYE14P-201ENST00000442619 822 ntBASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CNOT7-211ENST00000523917 1885 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 DPAGT1-217ENST00000639704 1719 ntTSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 ZNF571-AS1-203ENST00000586139 2684 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TMOD1-202ENST00000375175 2516 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SLC45A2-201ENST00000296589 1772 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 TMEM169-202ENST00000406027 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 ANAPC7-203ENST00000455511 3045 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 C3orf20-202ENST00000412910 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 AC018445.4-201ENST00000624066 2291 ntBASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SLC25A25-204ENST00000373069 3376 ntTSL 5 BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 PIK3CG-205ENST00000496166 5197 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
SEC22CQ9BRL7 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 FGFRL1-202ENST00000398484 3639 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 AL590440.2-201ENST00000641973 1595 ntBASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CASC4-202ENST00000345795 3764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ALDH1L1-205ENST00000452905 2758 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 LINC01024-201ENST00000499203 2769 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 IKZF1-206ENST00000359197 3487 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 ATE1-208ENST00000540606 5165 ntTSL 2 BASIC12.06□□□□□ -0.48
SEC22CQ9BRL7 PCDHB4-201ENST00000194152 3825 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms