Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 GRK6P1-201ENST00000400595 1711 ntBASIC16.66■□□□□ 0.26
TRIM47Q96LD4 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AC136944.4-201ENST00000568893 660 ntTSL 4 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AC011471.3-201ENST00000623576 402 ntBASIC16.66■□□□□ 0.26
TRIM47Q96LD4 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM47Q96LD4 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AC015802.1-201ENST00000588104 1449 ntBASIC16.65■□□□□ 0.26
TRIM47Q96LD4 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AL512306.1-201ENST00000432698 848 ntBASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 DGAT2L7P-201ENST00000602462 744 ntBASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AC012073.1-201ENST00000606114 1108 ntBASIC16.65■□□□□ 0.26
TRIM47Q96LD4 AC027601.5-201ENST00000624065 2482 ntBASIC16.65■□□□□ 0.26
TRIM47Q96LD4 TMPRSS4-211ENST00000522307 1634 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 NCBP2-206ENST00000447325 2216 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
TRIM47Q96LD4 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
TRIM47Q96LD4 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.26
TRIM47Q96LD4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.64■□□□□ 0.26
TRIM47Q96LD4 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 MOCS3-201ENST00000244051 5106 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 ADSL-201ENST00000216194 1620 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 RN7SKP109-201ENST00000410592 316 ntBASIC16.64■□□□□ 0.25
TRIM47Q96LD4 AC022447.6-201ENST00000515522 438 ntBASIC16.64■□□□□ 0.25
TRIM47Q96LD4 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 NAMA-206ENST00000605377 509 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM47Q96LD4 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms