Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 SALL4P6-201ENST00000429385 1691 ntBASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 CARS-AS1-201ENST00000499962 2664 ntTSL 2 BASIC16.53■□□□□ 0.24
CHAMP1Q96JM3 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 ABCD1P2-201ENST00000429313 1601 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 AL354989.2-201ENST00000435838 1540 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 SNX21-203ENST00000372541 771 ntTSL 2 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 MIR1202-201ENST00000408529 83 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 AC010141.1-201ENST00000411585 623 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 HIST2H2BB-201ENST00000449108 381 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 SHC1P1-201ENST00000425230 1745 ntBASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CHAMP1Q96JM3 TGM3-201ENST00000381458 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 DDX50-201ENST00000373585 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 RSPO2-202ENST00000517781 2748 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CHAMP1Q96JM3 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 DTX1-201ENST00000257600 3455 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PIK3R1-213ENST00000521657 3891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 TUBB4AP1-201ENST00000450755 1325 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 GUCY1B3-204ENST00000505154 2316 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 GMPR2-223ENST00000559836 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC244394.1-201ENST00000435000 1665 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 CCT8L1P-201ENST00000465400 1674 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 BCYRN1-201ENST00000418539 200 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC136604.1-202ENST00000425471 771 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 ST13P19-201ENST00000442505 1124 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 ACA64.2-201ENST00000459014 129 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PPY2P-201ENST00000582808 702 ntBASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 UBA2-201ENST00000246548 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 CLCN7-203ENST00000448525 4151 ntTSL 2 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CHAMP1Q96JM3 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 SLC26A8-202ENST00000394602 3144 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHAMP1Q96JM3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms