Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AGAP12P-201ENST00000585227 2359 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 PTPRVP-205ENST00000641549 5067 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CEP131-201ENST00000269392 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CYP26B1-205ENST00000546307 4331 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 SEMA6D-202ENST00000354744 5931 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AR-208ENST00000612452 10676 ntTSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 MIR770-201ENST00000390219 98 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AL391647.1-201ENST00000395664 511 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 TLE1P1-201ENST00000422965 589 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 INO80C-206ENST00000586489 594 ntTSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC009474.1-201ENST00000455096 1565 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 TNRC6C-205ENST00000588061 8419 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC131902.2-201ENST00000566892 2172 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.71□□□□□ -0.38
RFT1Q96AA3 FBN1-201ENST00000316623 11756 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RFT1Q96AA3 MSTO2P-201ENST00000314835 1709 ntBASIC12.71□□□□□ -0.38
RFT1Q96AA3 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
RFT1Q96AA3 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
RFT1Q96AA3 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
RFT1Q96AA3 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC12.71□□□□□ -0.38
RFT1Q96AA3 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL391825.1-201ENST00000457671 1364 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 ADAMTSL2-203ENST00000393061 4270 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL138725.1-201ENST00000407347 1314 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL162726.2-201ENST00000438986 1017 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 AC093433.1-201ENST00000458048 571 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AP001063.1-201ENST00000568332 529 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 PAM16-204ENST00000571941 674 ntTSL 3 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 WFDC1-204ENST00000613603 549 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 AL603764.1-201ENST00000636452 321 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
RFT1Q96AA3 VENTXP1-201ENST00000569334 2716 ntBASIC12.7□□□□□ -0.38
RFT1Q96AA3 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
RFT1Q96AA3 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms