Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 AC067931.2-201ENST00000623655 2003 ntBASIC12.5□□□□□ -0.41
TMEM54Q969K7 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC12.5□□□□□ -0.41
TMEM54Q969K7 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
TMEM54Q969K7 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC073548.1-201ENST00000624088 1882 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 SALL4P6-201ENST00000429385 1691 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC008620.2-201ENST00000510294 1569 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 SPTLC1P5-201ENST00000450718 252 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC099548.2-209ENST00000480264 625 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ALG1L13P-202ENST00000519320 584 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 POU5F1P2-201ENST00000521750 823 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC12.49□□□□□ -0.41
TMEM54Q969K7 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.49□□□□□ -0.41
TMEM54Q969K7 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
TMEM54Q969K7 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
TMEM54Q969K7 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
TMEM54Q969K7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms