Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 FGFR3P1-201ENST00000449999 601 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC018638.5-201ENST00000450885 754 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 RN7SL788P-201ENST00000460504 316 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC087269.1-202ENST00000519147 400 ntTSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 FOS-206ENST00000555347 1280 ntTSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC011474.4-201ENST00000623523 2076 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AL512430.1-201ENST00000392575 860 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 CHCHD2P9-201ENST00000461726 456 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TPM1-223ENST00000560445 485 ntTSL 3 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC015917.2-201ENST00000580714 493 ntTSL 3 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 SIGLEC22P-201ENST00000599104 714 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC018635.2-201ENST00000608625 364 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 Metazoa_SRP.69-201ENST00000615730 281 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AC242376.2-201ENST00000619355 883 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AGAP10P-201ENST00000454844 2418 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
ARHGEF39Q8N4T4 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ARHGEF39Q8N4T4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.27
ARHGEF39Q8N4T4 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.33□□□□□ -0.27
ARHGEF39Q8N4T4 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
ARHGEF39Q8N4T4 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
ARHGEF39Q8N4T4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 OR2V1-201ENST00000329365 948 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 NUDT1-202ENST00000343985 771 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
ARHGEF39Q8N4T4 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms