Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC012044.1-201ENST00000603431 297 ntBASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 AL353770.1-201ENST00000614915 403 ntBASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRIM48Q8IWZ4 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 LAP3P2-201ENST00000454686 1454 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 ELK2AP-201ENST00000392510 1007 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 PDIA3P2-201ENST00000428073 158 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 IGLV3-15-201ENST00000518356 244 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 CHMP4BP1-201ENST00000556017 588 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 LINC01783-202ENST00000614408 828 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 MIR6769A-201ENST00000617340 73 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 BX284668.2-205ENST00000619677 828 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 AC015909.3-201ENST00000572855 1794 ntBASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRIM48Q8IWZ4 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 LINC01165-201ENST00000445190 1623 ntBASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 MBP-201ENST00000354542 575 ntTSL 2 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 CSNK2B-201ENST00000375865 908 ntAPPRIS P1 TSL 3 BASIC14.05□□□□□ -0.16
TRIM48Q8IWZ4 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms