Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 ZNF384-201ENST00000319770 3266 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 C1GALT1-205ENST00000436587 6235 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 VWA5B2-201ENST00000273794 3486 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 KIF14-201ENST00000367350 7274 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 POLE-207ENST00000535270 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
KCNIP4Q6PIL6 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 PFKFB3-203ENST00000379775 4483 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 BIVM-ERCC5-204ENST00000639132 5195 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 HERC2P3-204ENST00000426501 5995 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 MYO10-210ENST00000513610 8038 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CAMTA2-202ENST00000361571 4777 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 PAX2-201ENST00000355243 4057 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CYP2AB1P-202ENST00000454440 1456 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC004832.2-201ENST00000426397 482 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC005237.2-201ENST00000434368 219 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CEND1P1-201ENST00000451006 455 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 KRT18P43-201ENST00000469825 1281 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 AC055717.3-201ENST00000622967 595 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ZNF124-202ENST00000472531 2243 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 GHITM-201ENST00000372134 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 TLK1-205ENST00000431350 5663 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 LINC02015-202ENST00000436078 2957 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 METAP1-201ENST00000296411 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 SPAG8-202ENST00000396638 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 DRD2-210ENST00000544518 2473 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 NPR3-201ENST00000265074 7344 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 KRT8P14-201ENST00000414254 1442 ntBASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 SRP54-201ENST00000216774 2279 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ILF3-201ENST00000250241 3035 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
KCNIP4Q6PIL6 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.63
KCNIP4Q6PIL6 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 HYPK-201ENST00000406925 4777 ntAPPRIS P2 TSL 2 BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
KCNIP4Q6PIL6 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms