Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
UBA52P62987 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC12.43□□□□□ -0.42
UBA52P62987 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 FAM197Y7-201ENST00000432892 766 ntBASIC12.43□□□□□ -0.42
UBA52P62987 HLA-DPB2-205ENST00000435074 1188 ntBASIC12.43□□□□□ -0.42
UBA52P62987 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.43□□□□□ -0.42
UBA52P62987 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC12.43□□□□□ -0.42
UBA52P62987 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
UBA52P62987 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.43□□□□□ -0.42
UBA52P62987 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC12.43□□□□□ -0.42
UBA52P62987 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
UBA52P62987 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 WDR26-201ENST00000414423 6872 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UBA52P62987 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UBA52P62987 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBA52P62987 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 AC006001.1-201ENST00000325130 474 ntBASIC12.42□□□□□ -0.42
UBA52P62987 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
UBA52P62987 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
UBA52P62987 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC12.42□□□□□ -0.42
UBA52P62987 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
UBA52P62987 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 AC104306.2-201ENST00000451877 341 ntBASIC12.42□□□□□ -0.42
UBA52P62987 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 ARTN-209ENST00000479128 471 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.42□□□□□ -0.42
UBA52P62987 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC12.42□□□□□ -0.42
UBA52P62987 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 56 ms