Protein–RNA interactions for Protein: P62306

SNRPF, Small nuclear ribonucleoprotein F, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPFP62306 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC15.4■□□□□ 0.06
SNRPFP62306 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 FMO6P-201ENST00000236166 1620 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRPFP62306 FAM90A2P-201ENST00000511144 1395 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 FAM90A25P-201ENST00000528404 1395 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 MIR645-201ENST00000385283 94 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC15.39■□□□□ 0.05
SNRPFP62306 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.39■□□□□ 0.05
SNRPFP62306 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC15.39■□□□□ 0.05
SNRPFP62306 AL353770.1-201ENST00000614915 403 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 TP53-221ENST00000615910 1149 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 AP001505.2-201ENST00000616815 443 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.39■□□□□ 0.05
SNRPFP62306 KRT8P43-201ENST00000406052 1458 ntBASIC15.39■□□□□ 0.05
SNRPFP62306 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SNRPFP62306 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SNRPFP62306 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 AC093462.1-201ENST00000621167 1683 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 AC130686.1-201ENST00000622936 2466 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
SNRPFP62306 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC15.38■□□□□ 0.05
SNRPFP62306 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC15.38■□□□□ 0.05
SNRPFP62306 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC15.38■□□□□ 0.05
SNRPFP62306 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 AC242376.1-201ENST00000559033 726 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 AC020922.3-201ENST00000595064 547 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 AL109837.1-201ENST00000603272 613 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC15.38■□□□□ 0.05
SNRPFP62306 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC15.38■□□□□ 0.05
SNRPFP62306 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.38■□□□□ 0.05
SNRPFP62306 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.38■□□□□ 0.05
SNRPFP62306 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.38■□□□□ 0.05
SNRPFP62306 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 C1R-202ENST00000536053 2347 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.38■□□□□ 0.05
SNRPFP62306 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SNRPFP62306 FAM90A12P-201ENST00000519497 2375 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 FAM90A24P-201ENST00000520792 2369 ntBASIC15.38■□□□□ 0.05
SNRPFP62306 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms