Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC15.66■□□□□ 0.1
PMS1P54277 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.66■□□□□ 0.1
PMS1P54277 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC15.66■□□□□ 0.1
PMS1P54277 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC15.66■□□□□ 0.1
PMS1P54277 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 DDC-214ENST00000622873 1839 ntTSL 3 BASIC15.66■□□□□ 0.1
PMS1P54277 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 GPR88-201ENST00000315033 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
PMS1P54277 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 CNTD1-204ENST00000588408 2369 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
PMS1P54277 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 AL445250.1-201ENST00000641671 2259 ntBASIC15.65■□□□□ 0.1
PMS1P54277 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 AC068888.1-207ENST00000546793 2863 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC15.65■□□□□ 0.1
PMS1P54277 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.65■□□□□ 0.1
PMS1P54277 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 AL591846.1-201ENST00000451736 433 ntBASIC15.65■□□□□ 0.1
PMS1P54277 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC15.65■□□□□ 0.1
PMS1P54277 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 SNORD3B-2-202ENST00000571722 791 ntBASIC15.65■□□□□ 0.1
PMS1P54277 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 MIR6805-201ENST00000615055 62 ntBASIC15.65■□□□□ 0.1
PMS1P54277 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 AC097376.2-205ENST00000610159 5334 ntBASIC15.65■□□□□ 0.1
PMS1P54277 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC15.65■□□□□ 0.1
PMS1P54277 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 ZNF263-202ENST00000538765 1721 ntTSL 2 BASIC15.65■□□□□ 0.1
PMS1P54277 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
PMS1P54277 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 LINC00638-201ENST00000555578 2518 ntBASIC15.64■□□□□ 0.09
PMS1P54277 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC15.64■□□□□ 0.09
PMS1P54277 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.64■□□□□ 0.09
PMS1P54277 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 BTBD6P1-201ENST00000412176 1267 ntBASIC15.64■□□□□ 0.09
PMS1P54277 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 AC078875.1-201ENST00000431907 724 ntBASIC15.64■□□□□ 0.09
PMS1P54277 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
PMS1P54277 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.64■□□□□ 0.09
PMS1P54277 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.64■□□□□ 0.09
PMS1P54277 AL023803.2-201ENST00000620080 638 ntBASIC15.64■□□□□ 0.09
PMS1P54277 CR392039.2-201ENST00000623182 509 ntBASIC15.64■□□□□ 0.09
PMS1P54277 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
PMS1P54277 PCDHA6-201ENST00000378126 3267 ntBASIC15.64■□□□□ 0.09
PMS1P54277 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC15.64■□□□□ 0.09
PMS1P54277 IRF4-201ENST00000380956 5331 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
PMS1P54277 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms