Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 RN7SL455P-201ENST00000580629 282 ntBASIC15.65■□□□□ 0.1
CDK7P50613 AL627230.2-201ENST00000613254 655 ntBASIC15.65■□□□□ 0.1
CDK7P50613 AP000769.1-203ENST00000637245 208 ntBASIC15.65■□□□□ 0.1
CDK7P50613 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK7P50613 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
CDK7P50613 ZEB1-AS1-208ENST00000607166 2503 ntBASIC15.65■□□□□ 0.1
CDK7P50613 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK7P50613 MYADML-201ENST00000474610 2147 ntBASIC15.65■□□□□ 0.1
CDK7P50613 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
CDK7P50613 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC15.65■□□□□ 0.1
CDK7P50613 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC15.65■□□□□ 0.1
CDK7P50613 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CDK7P50613 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CDK7P50613 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CDK7P50613 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC15.64■□□□□ 0.1
CDK7P50613 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC15.64■□□□□ 0.09
CDK7P50613 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 PTGER4P2-201ENST00000328411 252 ntBASIC15.64■□□□□ 0.09
CDK7P50613 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC15.64■□□□□ 0.09
CDK7P50613 HNRNPA1P58-201ENST00000403629 610 ntBASIC15.64■□□□□ 0.09
CDK7P50613 IGLV9-49-201ENST00000427632 409 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
CDK7P50613 PTGER4P3-201ENST00000458150 252 ntBASIC15.64■□□□□ 0.09
CDK7P50613 AC025186.1-201ENST00000478174 870 ntBASIC15.64■□□□□ 0.09
CDK7P50613 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 EEF1GP8-201ENST00000506566 1154 ntBASIC15.64■□□□□ 0.09
CDK7P50613 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK7P50613 CES1P2-201ENST00000566467 1242 ntBASIC15.64■□□□□ 0.09
CDK7P50613 MME-218ENST00000625667 363 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 PLS3-210ENST00000626746 216 ntTSL 4 BASIC15.64■□□□□ 0.09
CDK7P50613 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CDK7P50613 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.64■□□□□ 0.09
CDK7P50613 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CDK7P50613 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDK7P50613 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK7P50613 MRPL33-201ENST00000296102 518 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 TRAPPC3-201ENST00000373159 590 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK7P50613 MRPL33-202ENST00000379666 404 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 AL929302.1-201ENST00000426556 871 ntBASIC15.63■□□□□ 0.09
CDK7P50613 JAZF1-AS1-201ENST00000436758 548 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 ASS1P2-201ENST00000439895 1223 ntBASIC15.63■□□□□ 0.09
CDK7P50613 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 AL160191.2-201ENST00000603975 601 ntBASIC15.63■□□□□ 0.09
CDK7P50613 C1orf232-202ENST00000635463 466 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.63■□□□□ 0.09
CDK7P50613 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CDK7P50613 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC15.63■□□□□ 0.09
CDK7P50613 RPL13AP3-202ENST00000494676 1473 ntBASIC15.63■□□□□ 0.09
CDK7P50613 AC215219.1-201ENST00000400706 1817 ntBASIC15.63■□□□□ 0.09
CDK7P50613 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 AC064801.2-201ENST00000625052 1303 ntBASIC15.63■□□□□ 0.09
CDK7P50613 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CDK7P50613 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CDK7P50613 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CDK7P50613 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms