Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 AC005840.4-201ENST00000541242 2494 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 KRT18P9-201ENST00000604826 1300 ntBASIC14.14□□□□□ -0.15
HMGCLP35914 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
HMGCLP35914 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
HMGCLP35914 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
HMGCLP35914 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
HMGCLP35914 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 PARVG-202ENST00000415224 999 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 AC026320.2-201ENST00000434379 478 ntBASIC14.13□□□□□ -0.15
HMGCLP35914 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCLP35914 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCLP35914 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.13□□□□□ -0.15
HMGCLP35914 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 AL109837.1-201ENST00000603272 613 ntBASIC14.13□□□□□ -0.15
HMGCLP35914 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.13□□□□□ -0.15
HMGCLP35914 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
HMGCLP35914 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
HMGCLP35914 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.13□□□□□ -0.15
HMGCLP35914 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 AC005252.3-201ENST00000623855 2258 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
HMGCLP35914 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
HMGCLP35914 AL133338.1-201ENST00000565695 1517 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
HMGCLP35914 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCLP35914 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.12□□□□□ -0.15
HMGCLP35914 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.12□□□□□ -0.15
HMGCLP35914 NUP210P1-202ENST00000504322 710 ntBASIC14.12□□□□□ -0.15
HMGCLP35914 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC14.12□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms