Protein–RNA interactions for Protein: P12838

DEFA4, Neutrophil defensin 4, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA4P12838 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 DDC-213ENST00000617822 1809 ntTSL 3 BASIC11.69□□□□□ -0.54
DEFA4P12838 INHBA-201ENST00000242208 6064 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
DEFA4P12838 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
DEFA4P12838 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC11.69□□□□□ -0.54
DEFA4P12838 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 CACNA2D2-202ENST00000360963 5272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 LINC02486-201ENST00000604157 3000 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 PUM2-203ENST00000361078 6251 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 CSNK1A1P1-201ENST00000430593 2147 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 NPAP1-201ENST00000329468 7526 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
DEFA4P12838 ANKRD30B-202ENST00000358984 4359 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC11.68□□□□□ -0.54
DEFA4P12838 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 EDF1-203ENST00000371649 790 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 AC005229.1-201ENST00000392885 409 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
DEFA4P12838 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC11.68□□□□□ -0.54
DEFA4P12838 PNKD-204ENST00000436005 978 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 RN7SL692P-201ENST00000464677 288 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 MESTP3-201ENST00000503460 968 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 POLE2-203ENST00000553805 496 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC11.68□□□□□ -0.54
DEFA4P12838 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC11.68□□□□□ -0.54
DEFA4P12838 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 AC138696.2-201ENST00000607376 223 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 AC025048.6-201ENST00000634326 1161 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 TCAM1P-207ENST00000485295 1537 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 PCDHA6-201ENST00000378126 3267 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 CSNK1G3-201ENST00000345990 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
DEFA4P12838 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 ZNF71-201ENST00000328070 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 AC118758.2-201ENST00000614242 2813 ntBASIC11.68□□□□□ -0.54
DEFA4P12838 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC11.68□□□□□ -0.54
DEFA4P12838 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.68□□□□□ -0.54
DEFA4P12838 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
DEFA4P12838 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 PCDHB18P-202ENST00000526308 3197 ntBASIC11.67□□□□□ -0.54
DEFA4P12838 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC11.67□□□□□ -0.54
DEFA4P12838 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 AL354989.2-201ENST00000435838 1540 ntBASIC11.67□□□□□ -0.54
DEFA4P12838 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 QSOX1-202ENST00000367602 9311 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
DEFA4P12838 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC11.67□□□□□ -0.54
DEFA4P12838 RPS6KA2-211ENST00000510118 5992 ntTSL 2 BASIC11.67□□□□□ -0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms