Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 GTF3A-209ENST00000640289 1098 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC8.47□□□□□ -1.05
APOBP04114 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
APOBP04114 AC024075.2-201ENST00000598112 1473 ntBASIC8.47□□□□□ -1.05
APOBP04114 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC8.46□□□□□ -1.05
APOBP04114 AC096536.3-201ENST00000415336 575 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 CHCHD2P6-201ENST00000454346 447 ntBASIC8.46□□□□□ -1.05
APOBP04114 RN7SL487P-201ENST00000468140 344 ntBASIC8.46□□□□□ -1.05
APOBP04114 AC025178.1-201ENST00000503441 834 ntTSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 COX14-204ENST00000550654 580 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC8.46□□□□□ -1.05
APOBP04114 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC8.46□□□□□ -1.05
APOBP04114 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 CKAP2-202ENST00000378034 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
APOBP04114 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC8.46□□□□□ -1.05
APOBP04114 TULP3P1-202ENST00000453253 1291 ntBASIC8.46□□□□□ -1.05
APOBP04114 RBMX-209ENST00000565438 1292 ntTSL 5 BASIC8.46□□□□□ -1.05
APOBP04114 RN7SL5P-201ENST00000581458 321 ntBASIC8.46□□□□□ -1.05
APOBP04114 MIR378I-201ENST00000582688 76 ntBASIC8.46□□□□□ -1.05
APOBP04114 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC8.46□□□□□ -1.05
APOBP04114 TMEM230-211ENST00000615008 594 ntTSL 4 BASIC8.46□□□□□ -1.05
APOBP04114 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
APOBP04114 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC8.46□□□□□ -1.06
APOBP04114 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC8.46□□□□□ -1.06
APOBP04114 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AF013593.1-201ENST00000458074 1487 ntBASIC8.46□□□□□ -1.06
APOBP04114 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 UBIAD1-201ENST00000376804 825 ntTSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 MNAT1-202ENST00000539616 1220 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 RN7SL162P-201ENST00000579233 292 ntBASIC8.46□□□□□ -1.06
APOBP04114 AC104423.1-201ENST00000591742 728 ntTSL 3 BASIC8.46□□□□□ -1.06
APOBP04114 RPS9-213ENST00000626547 476 ntTSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 SNORA50D-202ENST00000627561 132 ntBASIC8.46□□□□□ -1.06
APOBP04114 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
APOBP04114 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 AC092384.3-202ENST00000564646 2873 ntBASIC8.46□□□□□ -1.06
APOBP04114 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC8.46□□□□□ -1.06
APOBP04114 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AC093462.1-201ENST00000621167 1683 ntBASIC8.46□□□□□ -1.06
APOBP04114 AC012370.2-204ENST00000601940 1320 ntTSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 SPINK2-201ENST00000248701 613 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 HIGD2B-201ENST00000311755 1116 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AP000487.2-201ENST00000324630 394 ntTSL 3 BASIC8.46□□□□□ -1.06
APOBP04114 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC8.46□□□□□ -1.06
APOBP04114 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC8.46□□□□□ -1.06
APOBP04114 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
APOBP04114 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
APOBP04114 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 AC144831.1-201ENST00000573312 2656 ntBASIC8.45□□□□□ -1.06
APOBP04114 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC8.45□□□□□ -1.06
APOBP04114 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
APOBP04114 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
APOBP04114 MAP1LC3BP1-202ENST00000438342 516 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms