Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 AC008763.2-203ENST00000595866 762 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CNOT4O95628 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.77□□□□□ -0.37
CNOT4O95628 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CNOT4O95628 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 LAP3P2-201ENST00000454686 1454 ntBASIC12.77□□□□□ -0.37
CNOT4O95628 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC12.77□□□□□ -0.37
CNOT4O95628 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC12.77□□□□□ -0.37
CNOT4O95628 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 SH3PXD2B-201ENST00000311601 7777 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 SON-203ENST00000381679 7860 ntTSL 5 BASIC12.77□□□□□ -0.37
CNOT4O95628 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CNOT4O95628 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
CNOT4O95628 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.76□□□□□ -0.37
CNOT4O95628 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 MSRA-203ENST00000441698 788 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 AL596276.2-201ENST00000447525 331 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.76□□□□□ -0.37
CNOT4O95628 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC12.76□□□□□ -0.37
CNOT4O95628 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.76□□□□□ -0.37
CNOT4O95628 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 MBP-227ENST00000526111 581 ntTSL 4 BASIC12.76□□□□□ -0.37
CNOT4O95628 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.76□□□□□ -0.37
CNOT4O95628 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC12.76□□□□□ -0.37
CNOT4O95628 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC12.76□□□□□ -0.37
CNOT4O95628 AL157813.1-201ENST00000612996 587 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 LAMB2-201ENST00000305544 5643 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 CICP20-201ENST00000443330 2801 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 LINC01230-201ENST00000625222 3017 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 AC090505.1-201ENST00000430515 1834 ntBASIC12.76□□□□□ -0.37
CNOT4O95628 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.76□□□□□ -0.37
CNOT4O95628 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CNOT4O95628 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CNOT4O95628 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CNOT4O95628 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC12.75□□□□□ -0.37
CNOT4O95628 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CNOT4O95628 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms