Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
USH2AO75445 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC6.11□□□□□ -1.43
USH2AO75445 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 CD300LB-201ENST00000314401 993 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 MAL-204ENST00000354078 831 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 CLK2P1-201ENST00000416636 1294 ntBASIC6.11□□□□□ -1.43
USH2AO75445 AC105424.1-201ENST00000514583 209 ntBASIC6.11□□□□□ -1.43
USH2AO75445 AC011479.2-201ENST00000598146 432 ntTSL 3 BASIC6.11□□□□□ -1.43
USH2AO75445 AC018766.1-201ENST00000601211 484 ntTSL 3 BASIC6.11□□□□□ -1.43
USH2AO75445 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 ZNF485-202ENST00000374435 2052 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 TCAF2P1-201ENST00000291129 2421 ntBASIC6.11□□□□□ -1.43
USH2AO75445 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC6.11□□□□□ -1.43
USH2AO75445 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC6.11□□□□□ -1.43
USH2AO75445 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 TRAF4-202ENST00000262396 683 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 VASH2-205ENST00000366967 1206 ntTSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 MARCKSL1P2-201ENST00000401037 976 ntBASIC6.11□□□□□ -1.43
USH2AO75445 RBMXP1-201ENST00000408004 1191 ntBASIC6.11□□□□□ -1.43
USH2AO75445 AC006987.4-201ENST00000430032 279 ntBASIC6.11□□□□□ -1.43
USH2AO75445 HLA-DRB9-201ENST00000449413 343 ntBASIC6.11□□□□□ -1.43
USH2AO75445 TULP3P1-202ENST00000453253 1291 ntBASIC6.11□□□□□ -1.43
USH2AO75445 AC100778.4-201ENST00000581232 582 ntTSL 4 BASIC6.11□□□□□ -1.43
USH2AO75445 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
USH2AO75445 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
USH2AO75445 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC6.11□□□□□ -1.43
USH2AO75445 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
USH2AO75445 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
USH2AO75445 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 OR52N1-201ENST00000317078 963 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USH2AO75445 KRTAP4-6-201ENST00000345847 1055 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
USH2AO75445 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AL161932.2-201ENST00000435436 679 ntBASIC6.1□□□□□ -1.43
USH2AO75445 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PRAMEF35P-201ENST00000458709 891 ntBASIC6.1□□□□□ -1.43
USH2AO75445 RPSAP5-201ENST00000485258 884 ntBASIC6.1□□□□□ -1.43
USH2AO75445 UBE2D3-221ENST00000507845 577 ntTSL 4 BASIC6.1□□□□□ -1.43
USH2AO75445 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 FAM86B1-215ENST00000533513 725 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 ADIPOR1P2-201ENST00000554199 820 ntBASIC6.1□□□□□ -1.43
USH2AO75445 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 PSMA1-201ENST00000396394 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 IFT43-202ENST00000314067 833 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC017081.1-201ENST00000420063 823 ntBASIC6.1□□□□□ -1.43
USH2AO75445 AC007383.2-201ENST00000420509 752 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC6.1□□□□□ -1.43
USH2AO75445 RN7SL789P-201ENST00000478944 293 ntBASIC6.1□□□□□ -1.43
USH2AO75445 IGHVII-74-1-201ENST00000517572 241 ntBASIC6.1□□□□□ -1.43
USH2AO75445 OR4A49P-201ENST00000527050 632 ntBASIC6.1□□□□□ -1.43
USH2AO75445 C9orf135-205ENST00000527647 748 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AP001102.1-201ENST00000528959 409 ntBASIC6.1□□□□□ -1.43
USH2AO75445 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AC089987.3-201ENST00000551847 588 ntTSL 4 BASIC6.1□□□□□ -1.43
USH2AO75445 AC046168.2-202ENST00000561123 926 ntTSL 3 BASIC6.1□□□□□ -1.43
USH2AO75445 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 PRL-203ENST00000617911 1364 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 GOLGA8G-203ENST00000525590 2009 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 GOLGA8F-202ENST00000532622 2009 ntAPPRIS P5 TSL 5 BASIC6.1□□□□□ -1.43
USH2AO75445 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 AC012617.1-204ENST00000586340 2305 ntBASIC6.1□□□□□ -1.43
USH2AO75445 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC6.1□□□□□ -1.43
USH2AO75445 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
USH2AO75445 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms