Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 AL139158.3-201ENST00000641212 1562 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 PPP1R2P4-201ENST00000424051 595 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 AL512306.1-201ENST00000432698 848 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 AL391415.1-201ENST00000439844 400 ntTSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 RN7SL181P-201ENST00000462921 277 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 AC130709.1-201ENST00000484779 1212 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC14.31□□□□□ -0.12
SMAD6O43541 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 NAA40-205ENST00000539656 577 ntTSL 4 BASIC14.31□□□□□ -0.12
SMAD6O43541 RN7SL190P-201ENST00000582519 257 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 RPL17P45-201ENST00000586289 509 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.31□□□□□ -0.12
SMAD6O43541 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 SIGLEC22P-201ENST00000599104 714 ntBASIC14.31□□□□□ -0.12
SMAD6O43541 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.31□□□□□ -0.12
SMAD6O43541 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC14.31□□□□□ -0.12
SMAD6O43541 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
SMAD6O43541 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.31□□□□□ -0.12
SMAD6O43541 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SMAD6O43541 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.3□□□□□ -0.12
SMAD6O43541 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
SMAD6O43541 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 HLA-DMA-203ENST00000395305 777 ntBASIC14.3□□□□□ -0.12
SMAD6O43541 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 GSTT2-201ENST00000402588 937 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 RPS2P36-201ENST00000456516 831 ntBASIC14.3□□□□□ -0.12
SMAD6O43541 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 AC138701.2-201ENST00000553634 226 ntBASIC14.3□□□□□ -0.12
SMAD6O43541 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC14.3□□□□□ -0.12
SMAD6O43541 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC14.3□□□□□ -0.12
SMAD6O43541 AC087045.2-201ENST00000606279 1003 ntBASIC14.3□□□□□ -0.12
SMAD6O43541 AC025262.2-201ENST00000623975 1056 ntBASIC14.3□□□□□ -0.12
SMAD6O43541 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
SMAD6O43541 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
SMAD6O43541 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
SMAD6O43541 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms