Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 AC079112.1-201ENST00000454972 939 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RN7SL8P-201ENST00000461771 266 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC120057.1-201ENST00000483947 663 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC005740.1-201ENST00000515639 522 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MTND2P38-201ENST00000522536 667 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 KLF17P1-201ENST00000547105 1126 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 HERC2P11-201ENST00000562845 725 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC005586.2-201ENST00000563946 837 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC100756.2-201ENST00000569537 736 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC007952.4-201ENST00000573866 637 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC103808.5-201ENST00000577797 462 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC006158.1-201ENST00000610661 249 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC009560.1-201ENST00000620208 434 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC009452.1-201ENST00000640823 606 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AC010327.5-201ENST00000586923 3061 ntBASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
KRTAP4-3Q9BYR4 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 AL928654.5-201ENST00000624831 2501 ntBASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 STK3-218ENST00000617590 2485 ntTSL 5 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
KRTAP4-3Q9BYR4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MARK2P16-201ENST00000605714 1723 ntBASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ATP13A1-202ENST00000357324 3861 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
KRTAP4-3Q9BYR4 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms