Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC099521.3-201ENST00000624251 2938 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC091046.1-201ENST00000331871 207 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AL592076.1-201ENST00000424448 303 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC008723.1-201ENST00000506922 207 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 LY6E-208ENST00000520531 490 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC103988.2-201ENST00000561804 725 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 AC133540.1-201ENST00000620845 1019 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 FAM90A2P-201ENST00000511144 1395 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 FAM90A25P-201ENST00000528404 1395 ntBASIC13.55□□□□□ -0.24
TM9SF4Q92544 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.55□□□□□ -0.24
TM9SF4Q92544 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 FETUB-207ENST00000450521 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
TM9SF4Q92544 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC130686.1-201ENST00000622936 2466 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 MAPT-IT1-201ENST00000624111 3016 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 UFM1-202ENST00000379649 846 ntTSL 4 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CEP164P1-201ENST00000455142 418 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC100858.3-202ENST00000533496 553 ntTSL 4 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 RBM8B-201ENST00000555532 525 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 NAT9-211ENST00000580632 799 ntTSL 3 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 Z98259.2-201ENST00000641583 609 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 AL122018.1-201ENST00000446607 2310 ntBASIC13.54□□□□□ -0.24
TM9SF4Q92544 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TM9SF4Q92544 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TM9SF4Q92544 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms