Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 STK25-235ENST00000543554 2556 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 RPL28-206ENST00000558752 671 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AC135782.3-201ENST00000562782 2105 ntBASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 ECM1P1-201ENST00000604092 1279 ntBASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 LARP4-220ENST00000615080 856 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 SLC4A8-205ENST00000535225 2262 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
RTN4IP1Q8WWV3 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC12.08□□□□□ -0.47
RTN4IP1Q8WWV3 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
RTN4IP1Q8WWV3 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AL590640.2-201ENST00000457038 527 ntBASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC007551.1-201ENST00000457394 519 ntBASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 LINC02486-201ENST00000604157 3000 ntBASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 AC064801.2-201ENST00000625052 1303 ntBASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
RTN4IP1Q8WWV3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms