Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AL138709.1-201ENST00000614840 1693 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AL118506.1-201ENST00000601296 3082 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 FAM168B-202ENST00000409185 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AC236430.1-201ENST00000402231 743 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PUDPP3-201ENST00000445368 636 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AC068587.3-201ENST00000526613 355 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AC190387.1-201ENST00000551683 408 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 COQ6-210ENST00000554920 649 ntTSL 3 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.64□□□□□ -0.39
DNAAF1Q8NEP3 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC064801.2-201ENST00000625052 1303 ntBASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 RRM2B-211ENST00000621845 3483 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 LCE3A-201ENST00000335674 270 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TERF1P3-201ENST00000505638 1227 ntBASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC135782.3-201ENST00000562782 2105 ntBASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 WASH4P-201ENST00000564273 1246 ntBASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 MIR5189-201ENST00000577370 114 ntBASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 MVK-217ENST00000639206 367 ntTSL 5 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 TRPV1-206ENST00000571088 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
DNAAF1Q8NEP3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms