Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 AL592076.1-201ENST00000424448 303 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 AL512306.1-201ENST00000432698 848 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 LINC02028-203ENST00000443776 453 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SLC25A15P3-201ENST00000505530 290 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 POLD4-208ENST00000532830 904 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 YRDCP1-201ENST00000621419 643 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 AP001184.1-201ENST00000637936 376 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 AL139158.3-201ENST00000641212 1562 ntBASIC13.37□□□□□ -0.27
ARHGEF39Q8N4T4 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 MPV17-204ENST00000399052 749 ntTSL 4 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AL627422.1-201ENST00000434104 580 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TMEM198B-204ENST00000484016 896 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 RN7SL81P-201ENST00000493781 261 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TP53-221ENST00000615910 1149 ntTSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 LINC01230-201ENST00000625222 3017 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 TUBB4AP1-201ENST00000450755 1325 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 AL928654.5-201ENST00000624831 2501 ntBASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
ARHGEF39Q8N4T4 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 MSRA-201ENST00000317173 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AC006372.4-201ENST00000624122 1543 ntBASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
ARHGEF39Q8N4T4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms