Protein–RNA interactions for Protein: Q6P2H8

TMEM53, Transmembrane protein 53, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53Q6P2H8 CAPN13-201ENST00000295055 2683 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PIK3R3-203ENST00000420542 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 USP3-204ENST00000540797 5474 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 KRT43P-201ENST00000434019 910 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 C2orf27AP3-201ENST00000434123 579 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SLC25A47P1-201ENST00000531577 414 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 DUX4L47-201ENST00000566374 394 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AL354718.3-201ENST00000616414 581 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 CR382287.1-201ENST00000623954 586 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AC023794.5-201ENST00000564380 2157 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 ELN-204ENST00000357036 3361 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PLCB3-201ENST00000279230 4197 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 GOLGA8VP-201ENST00000559009 1798 ntBASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 CTRC-201ENST00000375943 3147 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
TMEM53Q6P2H8 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 ACTR3-201ENST00000263238 6718 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AL008727.1-201ENST00000564460 4728 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 VASH2-203ENST00000366965 3572 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 ODF2-213ENST00000448249 2059 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC005229.1-201ENST00000392885 409 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AP001889.1-201ENST00000525414 633 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 FUZ-207ENST00000526575 482 ntTSL 4 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC008735.3-201ENST00000596646 500 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC233724.13-201ENST00000598383 410 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 AC145423.3-201ENST00000615987 467 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 IGHV3-72-202ENST00000621503 303 ntBASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
TMEM53Q6P2H8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms