Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 STK26-204ENST00000481105 1835 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 RPS3-201ENST00000278572 907 ntTSL 3 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 SERPINA13P-202ENST00000478994 924 ntBASIC12.47□□□□□ -0.41
HIST1H3AP68431 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AC239800.4-201ENST00000603712 296 ntBASIC12.47□□□□□ -0.41
HIST1H3AP68431 Six3os1_5.1-201ENST00000611000 271 ntBASIC12.47□□□□□ -0.41
HIST1H3AP68431 STPG3-204ENST00000611378 1015 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 NEDD4L-205ENST00000400345 3647 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
HIST1H3AP68431 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
HIST1H3AP68431 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AC061965.1-201ENST00000560524 1465 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AMT-256ENST00000638063 1783 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 PTPA-218ENST00000435132 618 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AC011742.3-201ENST00000439053 820 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 GOLGA2P8-201ENST00000505201 779 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 MARK2P5-201ENST00000507649 634 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 AC126915.1-201ENST00000522847 1038 ntBASIC12.46□□□□□ -0.41
HIST1H3AP68431 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 EID1-202ENST00000560490 584 ntTSL 3 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
HIST1H3AP68431 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
HIST1H3AP68431 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.46□□□□□ -0.42
HIST1H3AP68431 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
HIST1H3AP68431 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
HIST1H3AP68431 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC12.46□□□□□ -0.42
HIST1H3AP68431 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
HIST1H3AP68431 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms