Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 EDF1-203ENST00000371649 790 ntTSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 FAM8A4P-201ENST00000435433 1213 ntBASIC12.77□□□□□ -0.37
ACTA1P68133 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC12.77□□□□□ -0.37
ACTA1P68133 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 TERF1P3-201ENST00000505638 1227 ntBASIC12.77□□□□□ -0.37
ACTA1P68133 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC12.77□□□□□ -0.37
ACTA1P68133 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.77□□□□□ -0.37
ACTA1P68133 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 JPT2-214ENST00000569765 782 ntTSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC12.77□□□□□ -0.37
ACTA1P68133 CHCHD2P3-201ENST00000603038 451 ntBASIC12.77□□□□□ -0.37
ACTA1P68133 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.77□□□□□ -0.37
ACTA1P68133 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC12.77□□□□□ -0.37
ACTA1P68133 ETV2-208ENST00000621247 941 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 AL033527.5-201ENST00000641382 801 ntBASIC12.77□□□□□ -0.37
ACTA1P68133 AC004899.2-201ENST00000622993 3860 ntBASIC12.77□□□□□ -0.37
ACTA1P68133 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 TRAF6-202ENST00000526995 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 CASP6-202ENST00000352981 1347 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.77□□□□□ -0.37
ACTA1P68133 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC12.77□□□□□ -0.37
ACTA1P68133 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.77□□□□□ -0.37
ACTA1P68133 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
ACTA1P68133 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
ACTA1P68133 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 CSPG4P11-201ENST00000560634 4910 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 SPATA7-217ENST00000556553 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 MIR661-201ENST00000384842 89 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
ACTA1P68133 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 ACTG1P3-201ENST00000431775 1114 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 SKA2-202ENST00000437036 625 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC12.76□□□□□ -0.37
ACTA1P68133 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC12.76□□□□□ -0.37
ACTA1P68133 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.76□□□□□ -0.37
ACTA1P68133 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.76□□□□□ -0.37
ACTA1P68133 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.76□□□□□ -0.37
ACTA1P68133 CTBP2P3-201ENST00000585629 1255 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 AL590824.1-201ENST00000403828 1349 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 KCNH6-204ENST00000581784 3017 ntTSL 2 BASIC12.76□□□□□ -0.37
ACTA1P68133 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 MSTO2P-201ENST00000314835 1709 ntBASIC12.76□□□□□ -0.37
ACTA1P68133 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC12.76□□□□□ -0.37
ACTA1P68133 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ACTA1P68133 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms